Draft genome sequence of adzuki bean
Web2 days ago · The availability of the high-quality draft genome of adzuki bean allowed us to characterize the RNAi machinery components. In this study, with a comprehensive analysis, a set of DCL, AGO, and RDR genes was characterized in adzuki bean, which supplied basic genomic information for these gene families and provided insights into the probable ... WebThe draft genome sequence of European pear (Pyrus communis L. ‘Bartlett’). PLoS ONE 9, e92644 ... Kang, Y. J. et al. Draft genome sequence of adzuki bean, Vigna angularis. Sci.
Draft genome sequence of adzuki bean
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WebApr 1, 2024 · The draft genome represents the first available genome assembly for O. scapulalis. The reference transcriptome of O. scapulalis will allow comparative expression studies. The new genomic and transcriptomic data enrich the public sequence databases for the Crambidae and Lepidoptera. WebAdzuki bean (Vigna angularis) is distinct in its high starch and low fat accumulation. However, the underlying genetic basis is still not well understood. In this study, we …
WebIn this study, VaNATA1, the N-acetyltransferase gene from Vigna angularis, was separately obtained from genomic DNA (gDNA) and complementary DNA (cDNA) samples using PCR. The two sequences amplified from gDNA and cDNA were exactly the same and were composed of 552 nucleotides, indicating that there is no intron insert in VaNATA1. WebGene ontology analysis of rice bean draft genome sequence. Functional descriptions were assigned to predict rice bean genes. ... The comparison of total genome positions revealed the coverage of >88% of the physical distance of the adzuki bean genome, with 42 conserved synteny blocks, 72% of the mung bean genome, ...
WebJul 6, 2015 · In adzuki bean, although about a draft genome covering 75% of the estimated genome size has been sequenced and 143,113 SSRs were detected , very few transcriptome sequences and EST-SSR markers are developed for this crop . In this study, more than 112 million sequence reads from adzuki bean transcriptome were obtained, … WebIn this study, a novel strain of Bacillus glycinifermentans sp. (JRCGR-1) was identified and its genome was sequenced and annotated. The genome was explored for putative …
WebThe consensus sequence was generated using SAMtools. The variation report in “bcf” format was converted into a “vcf” file using BCFTools. Results Whole Genome …
WebFeb 1, 2024 · The genome assembly spans … We present a draft genome assembly with a de novo prediction and automated functional annotation of coding genes, and a reference transcriptome of the Adzuki bean borer, Ostrinia scapulalis, based on RNA sequencing of various tissues and developmental stages. hall of fame pink floyd inductionWebJan 19, 2010 · Adzuki or small red beans (Vigna angularis) are a popular ingredient in many confections in the Orient.The predominant use of adzuki in traditional Japanese confections is a paste or wagashi such as youkan, manju and amanatto [1,2,3].Adzuki beans are a rich source of carbohydrates, protein, vitamins, minerals and fiber []; … hall of fame pitcher dennisWebOct 13, 2015 · The draft genome sequence of adzuki bean was assembled on 11 pseudo-chromosomes, estimating 612 Mb or 75% of the estimated genome and high-confidence 26,857 protein-coding genes … burberry blazer for womenWebThe draft genome se- quence provides a resource for studying adzuki bean genomics and genetics, promoting adzuki bean improvement. Results and Discussion Genome … burberry blanket wrapWebFeb 13, 2014 · One important aspect of assembly quality is total sequencing coverage. Total coverage in RPGC is equal to (# F 2 s)* (coverage/F 2 ), so that 5× coverage for … burberry blazer gold buttonsWebHere, we assembled a draft genome of adzuki bean into pseudo-chromosomes using sequence data from next … burberry b lens sunglassesWebRice Bean (Vigna umbellata) draft genome sequence: unravelling the late flowering and unpalatability related genomic resources for efficient domestication of this underutilized crop Tanushri Kaul Rice bean is a less well known and underutilized legume crop that has proved to be highly favourable due to its rich nutritional value in comparison ... burberry blazers for women